Publications

2021

• Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients.
  Aschenbrenner AC, Mouktaroudi M, Krämer B, Oestreich M, Antonakos N, Nuesch-Germano M, Gkizeli K, Bonaguro L, Reusch N, Baßler K, Saridaki M, Knoll R, Pecht T, Kapellos TS, Doulou S, Kröger C, Herbert M, Holsten L, Horne A, Gemünd ID, Rovina N, Agrawal S, Dahm K, van Uelft M, Drews A, Lenkeit L, Bruse N, Gerretsen J, Gierlich J, Becker M, Händler K, Kraut M, Theis H, Mengiste S, De Domenico E, Schulte-Schrepping J, Seep L, Raabe J, Hoffmeister C, ToVinh M, Keitel V, Rieke G, Talevi V, Skowasch D, Aziz NA, Pickkers P, van de Veerdonk FL, Netea MG, Schultze JL, Kox M, Breteler MMB, Nattermann J, Koutsoukou A, Giamarellos-Bourboulis EJ, Ulas T, German COVID-19 Omics Initiative (DeCOI)
  Genome Med 2021, 13(1), 7
  
• Impact of comorbidities and body mass index on the outcome of polycythemia vera patients.
  Benevolo G, Elli EM, Bartoletti D, Latagliata R, Tiribelli M, Heidel FH, Cavazzini F, Bonifacio M, Crugnola M, Binotto G, D'Addio A, Tieghi A, Bergamaschi M, Caocci G, Polverelli N, Bossi E, Auteri G, Carmosino I, Catani L, Cuneo A, Krampera M, Lanza F, Lemoli RM, Vianelli N, Breccia M, Palumbo GA, Cavo M, Palandri F
  Hematol Oncol 2021, 39(3), 409-18
  
• A marine Chlamydomonas sp. emerging as an algal model.
  Carrasco Flores D, Fricke M, Wesp V, Desirò D, Kniewasser A, Hölzer M, Marz M, Mittag M
  J Phycol 2021, 57(1), 54-69
  
• EpiDope: A Deep Neural Network for linear B-cell epitope prediction.
  Collatz M, Mock F, Barth E, Hölzer M, Sachse K, Marz M
  Bioinformatics 2021, 37(4), 448-55
  
• Molecular Mechanisms of Senescence and Implications for the Treatment of Myeloid Malignancies.
  Ernst P, Heidel FH
  Cancers (Basel) 2021, 13(4), 612
  
• The Hematopoietic Bone Marrow Niche Ecosystem.
  Fröbel J, Landspersky T, Percin G, Schreck C, Rahmig S, Ori A, Nowak D, Essers M, Waskow** C, Oostendorp** RAJ
  Front Cell Dev Biol 2021, 9, 705410 ** co-corresponding authors
  
• RNA:DNA triple helices: from peculiar structures to pervasive chromatin regulators.
  Greifenstein* AA, Jo* S, Bierhoff H
  Essays Biochem 2021, 65(4), 731-40 * equal contribution
  
• The Genomic Landscape of Myeloid Malignancies: Options for Pan-myeloid Therapies?
  Heidel FH, Platzbecker U
  Hemasphere 2021, 5(3), e537
  
• Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research.
  Hufsky F, Lamkiewicz K, Almeida A, Aouacheria A, Arighi C, Bateman A, Baumbach J, Beerenwinkel N, Brandt C, Cacciabue M, Chuguransky S, Drechsel O, Finn RD, Fritz A, Fuchs S, Hattab G, Hauschild AC, Heider D, Hoffmann M, Hölzer M, Hoops S, Kaderali L, Kalvari I, von Kleist M, Kmiecinski R, Kühnert D, Lasso G, Libin P, List M, Löchel HF, Martin MJ, Martin R, Matschinske J, McHardy AC, Mendes P, Mistry J, Navratil V, Nawrocki EP, O'Toole ÁN, Ontiveros-Palacios N, Petrov AI, Rangel-Pineros G, Redaschi N, Reimering S, Reinert K, Reyes A, Richardson L, Robertson DL, Sadegh S, Singer JB, Theys K, Upton C, Welzel M, Williams L, Marz M
  Brief Bioinform 2021, 22(2), 642-63
  
• Poststroke dendritic arbor regrowth requires the actin nucleator Cobl.
  Ji Y, Koch D, González Delgado J, Günther M, Witte OW, Kessels MM, Frahm C, Qualmann B
  PLoS Biol 2021, 19(12), e3001399